Merge branch 'master' into 'Keane_Branch'

# Conflicts:
#   Example01_SimpleMessageFlow_EventCoordination.mp
#   Example01a_UnreliableMessageFlow_VirtualEvents.mp
#   Example02_DataFlow_EventSharing.mp
#   Example03_ATMWithdrawal_BehaviorOfEnvironment.mp
#   Example06_UnreliableChannel_AssertionChecking.mp
#   Example09_PipeFilter_TraceAnnotationQueries.mp
#   Example12_CardiacArrestWorkflow_VirtualEvents.mp
#   Example15_BackpackWeight_IntervalAttributes.mp
#   Example18_RedGreen_BayesianProbabilityCalculationsType2.mp
#   Example21_DataFlow_LocalReport.mp
#   Example22_SimpleMessageFlow_GlobalReport.mp
#   Example24_Compiler_ComponentDiagram.mp
#   Example25_Graph_as_Data_Structure.mp
#   Example26_UnreliableMessageFlow_GlobalQuery.mp
#   Example28_AssemblingStatistics_Histogram.mp
#   Example29_AssemblingStatistics_Gantt_Chart.mp
#   Example30_MicrowaveOven_ModelingModelChecking.mp
#   Example33_ATMWithdrawal_StatechartView.mp
#   Example35_FiniteStateDiagram_PathDiagram.mp
#   Example36_Authentication_SystemReuse.mp

Application_examples/Authentication.mp

-/*******************************************************************************
+/* Model of [Authentication]
 
 A Model for Simple Authentication
 
@@ -9,7 +9,7 @@ constraints.
   modified by K.Giammarco on 08/07/2017 for capitalization of state events
   modified by K.Giammarco on 08/07/2017 for ENSURE constraints
   
-********************************************************************************/
+==========================================================*/
 
 SCHEMA Authentication
 
@@ -53,4 +53,4 @@ ENSURE #CREDS_INVALID <= 3;
 
 ENSURE #Deny_access >= 3 <-> #Lock_account == 1;
 
-ENSURE #Grant_access >= 1 -> #Lock_account == 0;
+ENSURE #Grant_access >= 1 -> #Lock_account == 0;
\ No newline at end of file

Application_examples/Autonomous_Car.mp

-/* A model of an autonomous car that was used to support a failure mode
+/* Model of [Autonomous_Car]
+
+A model of an autonomous car that was used to support a failure mode
 analysis of autonomous automobile technology (student project). 
 Created by G. Kaminski, November 2015
-*/
+
+==========================================================*/
 
 SCHEMA Autonomous_Car
 
@@ -55,4 +58,4 @@ COORDINATE 	$a: Confirm_Destination_Found 	FROM Car,
 COORDINATE 	$a: ( Enter_New_Destination | 
     				Confirm_Destination ) 	FROM User,
 			$b: Begin_Trip 					FROM Car
-	DO ADD $a PRECEDES $b; OD;
+	DO ADD $a PRECEDES $b; OD;
\ No newline at end of file

Application_examples/Beginner_Use_of_MP.mp

-/* A Simple Model of Beginner MP-Firebird Use
+/* Model of [Beginner_Use_of_MP]
+
+A Simple Model of Beginner MP-Firebird Use
 created by K.Giammarco 2021-02-08
 
 This model provides an orientation for those just getting started using 
@@ -19,8 +21,9 @@ You may also make changes to this model and run it with your changes.
 Save your model using the EXPORT button ("Code" exports a .mp text file 
 of the contents of the text editor, and "Code and Event Trace" exports 
 the contents of the text editor plus the graphs and any changes you made 
-to the graph element positions. */
+to the graph element positions.
 
+==========================================================*/
 
 SCHEMA Beginner_Use_of_MP
 
@@ -86,4 +89,4 @@ IF #Find_issue >1 THEN
 	ELSE 	IF #Find_issue ==1 THEN 
 			SAY( #Find_issue " issue was discovered");
 			FI;
-FI;
+FI;
\ No newline at end of file

Application_examples/CargoScreening.mp

-/*	Cargo Screening process model
+/* Model of [CargoScreening]
+
+Cargo Screening process model
 May 6, 2011, draft written by Mikhail Auguston, NPS, Monterey, CA
 source:  
 Department of Homeland Security 
@@ -18,7 +20,7 @@ MP-Firebird may be used at least for the following:
 	was it always preceded by ThreatIsNotFound or No_high_risk_cargo_selected events?"
 - typical query may be: "show all scenarios when Loading event does not happen"
 
-*/
+==========================================================*/
 
 SCHEMA CargoScreening
 

Application_examples/Commercial_Flight

-/* Model of a commercial flight, November 27, 2013
+/* Model of [Commercial_Flight]
+
+Model of a commercial flight, November 27, 2013
 
 This model demonstrates the interlacing of root events as Phases 
 and as Actors.  The commented out code at the bottom represents
 a simulation of COORDINATE statements with SHARE ALL statements before
 COORDINATE statements were implemented in the early MP tools.
 
-*/
+==========================================================*/
 
 /*-----------------------------------------------------
  	Phases

Application_examples/Cycle_Pattern.mp

-/***************************************
+/* Model of [Cycle_Pattern]
+ 
  Cycle_ISP Model for Systems Journal Article
  Available at https://www.mdpi.com/2079-8954/6/2/18
  created 2018-03-10 by K.Giammarco 
@@ -18,7 +19,7 @@ the different possible patterns for Cycle.
 Running at scope 1 will generate zero traces because
 of the ENSURE constraint on line 29.
 
-****************************************/
+==========================================================*/
 
 SCHEMA Cycle_ISP_v2
 

Application_examples/Dining_Philosophers.mp

-/* Example 17, Dining_Philosophers.mp
+/* Model of [Dining_Philosophers]
+
+Example 17, Dining_Philosophers.mp
 Five silent philosophers sit at a table around a bowl of spaghetti. 
 A fork is placed between each pair of adjacent philosophers. 
 It was originally formulated in 1965 by Edsger Dijkstra.
@@ -30,7 +32,8 @@ scope 3 yields 6 traces  in approx. 0.05 sec.
 scope 4 yields 14 traces in approx. 0.44 sec.
 scope 5 yields 30 traces in approx. 1.6 sec.
 
-============================================================================*/
+==========================================================*/
+
 SCHEMA Dining_Philosophers
 
 ROOT Philosophers: {+<$$scope> 	Philosopher +};

Application_examples/Elevator.mp

-/*Elevator Model
+/* Model of [Elevator]
+
+Elevator Model
 
 K.Giammarco circa 2011
 
@@ -13,7 +15,7 @@ in the case of this model,
 ( 	Elevator_works_fine Get_Off |
     Emergency_Situation Call_for_help )
     
-*/
+==========================================================*/
 
 SCHEMA ELEVATOR
 
@@ -40,4 +42,4 @@ COORDINATE $a: Call_for_help FROM Passenger,
 Passenger, Elevator SHARE ALL Available, Non_Available;
 Passenger, Maintenance_Personnel SHARE ALL Emergency_Situation, Elevator_works_fine;
 
-                 
+                 
\ No newline at end of file

Application_examples/FindAdvisor.mp

-/* example63_Find_Advisor.mp
-	modeling human interactions
+/* Model of [FindAdvisor]
+
+example63_Find_Advisor.mp
+modeling human interactions
 	
 Human interaction and organizational processes can be modeled as well as technological
 system and subsystem interactions.
@@ -18,8 +20,7 @@ produce more scenarios).
 The "Sequence" or "Swim Lanes" layouts are the most appropriate for browsing traces here. 
 The "Sequence" mode yields views very similar to the UML or SysML Sequence Diagrams. 
 
-*/
-
+==========================================================*/
 
 /*—————————————————————————————
  	 		  Actors
@@ -62,4 +63,4 @@ COORDINATE 	$a: Recommend_another_approach  FROM Advisor,
 		$b: Find_another_approach  	FROM Student
 	DO ADD $a PRECEDES $b; OD;
 
-Student, Advisor SHARE ALL Discuss_research_interests;
+Student, Advisor SHARE ALL Discuss_research_interests;
\ No newline at end of file

Application_examples/First_Responder.mp

-/* A first responder scenario involving the administation of a rescue 
+/* Model of [First_Responder]
+
+A first responder scenario involving the administation of a rescue 
 medication (Narcan) to an overdose victim by a First Responder or a 
 Bystander.  
 
@@ -9,7 +11,7 @@ scenarios emerged that was previously not considered.  Trace 6 and others
 show a double administration of Narcan by both the bystander and the first 
 responder.
 
-*/
+==========================================================*/
 
 SCHEMA Narcan_Administration
 

Application_examples/Knapsack_Weight_Limit.mp

-/* Example 38 Knapsack
+/* Model of [Knapsack_Weight_Limit]
+
+Example 38 Knapsack
 
 	This is a case of well-known Knapsack Dynamic Programming Problem.
     In general it is NP-hard and NP-complete 
@@ -12,7 +14,9 @@
     small N,in particular, it stabilizes at scope 4).
     
 	Run for scope 1 and up to 5
-*/
+
+==========================================================*/
+
 SCHEMA Knapsack
 
 ATTRIBUTES { number limit, accumulated_total, current_max,

Application_examples/MP_Architecture_Specification.mp

-/* 	Example 28
+/* Model of [MP_Architecture_Specification]
+
+Example 28
  	MP compiler/trace generator architecture model 
     
     run for scope 1 or more
     
-===================================================*/
+==========================================================*/
+
 SCHEMA MP_architecture
 
 ROOT User:

Application_examples/Manufacturing_Process.mp

-/*
+/* Model of [Manufacturing_Process]
 
 Application of Monterey Phoenix Modeling to Manufacturing Product Systems
 An example pre-dating MP-Firebird application that was used to generate scenarios
@@ -7,7 +7,7 @@ MP version 4 may be used to conduct such analysis with its native capabilities.
 Created by: John Palmer
 August 2014
 
-*/
+==========================================================*/
 
 SCHEMA Manufacturing_System
 

Application_examples/Martian_Lander.mp

-/* 	Example 45. Real time system behavior modeling.
+/* Model of [Martian_Lander]
+
+Example 45. Real time system behavior modeling.
 	Landing system for Martian Lander.
 
 	MP model written by M.Auguston following example 1 and Appendix B from
@@ -52,7 +54,9 @@ CKDT 	10
 RRM 	10
 
 	run for scope 1 and up.
-*/
+
+==========================================================*/
+
 SCHEMA Martian_Lander
 
 ROOT Measure_and_display:

Application_examples/Prisoners_Dilemma.mp

-/* The Prisoner's Dilemma 
+/* Model of [Prisoners_Dilemma]
+
+The Prisoner's Dilemma 
 Michael Collins
 August 10, 2020.
 https://en.wikipedia.org/wiki/Prisoner%27s_dilemma
@@ -54,8 +56,7 @@ in all other circumstances the payoff for Bob   = 0.
 To map it to classic values to show negative payoffs -- that is a sort of normalizing. 
 The total payoff is computed from the assignments above and then subtracting 2. 
 
-*/
-
+==========================================================*/
 
 /*—————————————————————————————
  	 		  Actors
@@ -83,4 +84,4 @@ payout_bob  := SUM{ $act:( do_not_confess_alice | confess_alice | do_not_confess
  		        Interactions
 ———————————————————————————————*/
 SAY( "Payout Alice = " payout_alice);
-SAY( "Payout Bob   = " payout_bob  );
+SAY( "Payout Bob   = " payout_bob  );
\ No newline at end of file

Application_examples/Railroad_Crossing_Safety.mp

-/*
+/* Model of [Railroad_Crossing_Safety]
+
 Example 27.	Timing attribute use.
 
 Railroad crossing example from [Formal Methods for Real-Time Computing, 1996].
@@ -8,7 +9,7 @@ each train enters and exits the crossing’s region.
 The main safety requirement is: if a train is in the crossing region, 
 then gate must be down.
 
-*/
+==========================================================*/
 
 SCHEMA Railroad_Crossing
 

Application_examples/Replay_Attack.mp

-/* 	Example 41. The description of Replay Attack
+/* Model of [Replay_Attack]
+
+Example 41. The description of Replay Attack
 	is available at 
 	https://en.wikipedia.org/wiki/Replay_attack
 
     run scope up to 5
-======================================*/
+
+==========================================================*/
 
 SCHEMA Replay_Attack
 

Application_examples/Small_Package_Delivery.mp

-/* Small Package Delivery
+/* Model of [Small_Package_Delivery]
 
 Taken from use case description in the Skyzer IM20 Mission Model 
 (Non-Combatant Operations Scenario):
@@ -33,7 +33,7 @@ root (line 36 and lines 114-128) and running that model subset, one can
 see 6 event traces, one of which is unexpected: the Air_Vehicle drops 
 the payload with no vessel in sight (trace 6).
 
-*/
+==========================================================*/
 
 SCHEMA Small_Package_Delivery
 

Application_examples/Spent_Fuel_Cooling_and_Cleanup.mp

-/* Cooling Pool
+/* Model of [Spent_Fuel_Cooling_and_Cleanup]
+
+Cooling Pool
 
 created by K.Giammarco 5/4/2020
 modified by K.Giammarco 5/8/2020 with D.VanBossuyt
@@ -7,8 +9,7 @@ modified by K.Giammarco 5/13/2020 with D.VanBossuyt
 The purpose of this model is to identify the components of and 
 interactions among a spent nuclear fuel cooling pool and its environment.
 
-*/
-
+==========================================================*/
 
 /*—————————————————————————————
  	 		  Actors

Application_examples/Spiral_Software_Process

-/* 	Example 16, model of the spiral software process
+/* Model of [Spiral_Software_Process]
+
+Example 16, model of the spiral software process
     
     This example also illustrates how Melvin Conway's law 
     can be modeled in MP: "organizations which design systems ... 
@@ -6,7 +8,8 @@
     communication structures of these organizations."
 
     run scope up to 5
-======================================*/
+
+==========================================================*/
 
 SCHEMA spiral